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GSJ:Received May 9, 2005: http://wbabin.net/saba/saba35.htm

Proteins Whose Functions are Modulated by Ligands or Enzymes

James Saba

Herein are disclosed materials and methods for isolating biomolecules, especially proteins, whose functions can be modulated by ligands or enzymes.

The method involves utilizing a library of chimeric biomolecules, wherein each member of the this library has a common portion which alone performs a function. Important functions include the enzymatic modifications of proteins or nucleic acids, and specific binding to other molecules.

In addition of the common portion, each library member comprises a second portion which is anticipated to modulate the function of the common portion. For example, if the common portion is a enzyme, the second portions could be contiguous polypeptide extensions as depicted in self explanatory Figure 1.

Other more complex chimeras wherein the second portions comprise an unnatural organic molecules are possible.

A similar process can be utilized to identify molecules whose functioning is inhibited, rather than activated, as shown in the self explanatory Figure 2.

An interesting utility of a binding molecule whose function is eliminated by a ligand or enzyme is shown in Figure 3, wherein a single-chain antibody is utilized in affinity isolation of a target protein.

This invention, as all the inventions described in this journal, is at the conceptual stage and a patent is anticipated. However, it is hoped that those with laboratories will investigate its full potential.

Reference:

1) Functional Screening Utilizing an Arrayed Library of Clonally Expanded Cells, Viruses, or Nucleic Acids.
Saba, JA Gen Sci J 2005 Feb 22